Documentation

Get oriented. Then go deeper.

A starting point for working with scRNA-agent. Detailed operational guides will be published alongside the Windows release.

Full guides coming with the Windows release

Getting started

The Windows application will guide runtime setup, model authentication, and local project creation.

Download & setup

Data formats

The supported input formats and preparation requirements will be published with the installer.

Ask about your dataset

Analysis workflow

Follow an adaptable framework from data intake and quality control through annotation and downstream analysis.

View the workflow

Projects

Organize analysis around local project files, decisions, and traceable outputs. Detailed project management instructions are coming with release.

Understand the workspace

Figures and reports

Review scientist-facing summaries alongside figures, tables, analysis artifacts, and technical reports. Export instructions are coming with release.

Explore project outputs

Privacy and data handling

Understand local computation, the protected Core, and context shared with your chosen model provider.

Read the data model

Account and membership

Learn about the 14-day trial, protected analysis access, and access to existing local results after membership ends.

View membership

Troubleshooting

Setup diagnostics and troubleshooting instructions will be published with the release. For now, contact support with a description of your question.

Contact support